Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyisobutyrate dehydrogenase | SAMN04488505_102802 | Not Available | Negative | 2843487 - 2844353 | 30374.9 |
| hypothetical protein | SAMN04488505_102803 | Not Available | Negative | 2844494 - 2844823 | 12878.4 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488505_102804 | Not Available | Positive | 2844937 - 2845557 | 24382.5 |
| ftsx-like permease family protein | SAMN04488505_102805 | Not Available | Positive | 2845687 - 2848056 | 88493.3 |
| pare toxin of type ii toxin-antitoxin system, parde | SAMN04488505_102806 | Not Available | Negative | 2848139 - 2848354 | 8141.78 |
| hypothetical protein | SAMN04488505_102807 | Not Available | Negative | 2848348 - 2848563 | 8232.66 |
| fecr family protein | SAMN04488505_102808 | Not Available | Positive | 2849118 - 2850146 | 39967.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102809 | Not Available | Positive | 2850166 - 2853723 | 131130.0 |
| starch-binding associating with outer membrane | SAMN04488505_102810 | Not Available | Positive | 2853742 - 2855493 | 64898.5 |
| hypothetical protein | SAMN04488505_102811 | Not Available | Positive | 2855670 - 2857406 | 61596.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
