Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN04488505_102792 | Not Available | Negative | 2830361 - 2831266 | 34069.4 |
| hypothetical protein | SAMN04488505_102793 | Not Available | Negative | 2831574 - 2832224 | 24437.5 |
| outer membrane cobalamin receptor protein | SAMN04488505_102794 | Not Available | Negative | 2832430 - 2834664 | 82868.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488505_102795 | Not Available | Negative | 2834773 - 2835603 | 30080.9 |
| arac-type dna-binding protein | SAMN04488505_102796 | Not Available | Negative | 2835687 - 2836487 | 30658.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_102797 | Not Available | Negative | 2836657 - 2838684 | 75219.6 |
| two component transcriptional regulator, lyttr family | SAMN04488505_102798 | Not Available | Negative | 2838860 - 2839564 | 26656.0 |
| histidine kinase | SAMN04488505_102799 | Not Available | Negative | 2839561 - 2840583 | 39055.4 |
| hypothetical protein | SAMN04488505_102800 | Not Available | Positive | 2840747 - 2842876 | 79983.4 |
| hypothetical protein | SAMN04488505_102801 | Not Available | Positive | 2843065 - 2843355 | 10673.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
