Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN04488505_102782 | Not Available | Positive | 2820288 - 2821007 | 27040.5 |
| hypothetical protein | SAMN04488505_102783 | Not Available | Positive | 2821074 - 2821505 | 15817.7 |
| hypothetical protein | SAMN04488505_102784 | Not Available | Positive | 2821652 - 2821882 | 8802.18 |
| gluconolactonase | SAMN04488505_102785 | Not Available | Positive | 2821969 - 2822901 | 33884.5 |
| predicted dehydrogenase | SAMN04488505_102786 | Not Available | Positive | 2823020 - 2824096 | 40046.9 |
| membrane dipeptidase | SAMN04488505_102787 | Not Available | Positive | 2824187 - 2825386 | 44743.6 |
| n-acyl-d-amino-acid deacylase | SAMN04488505_102788 | Not Available | Positive | 2825391 - 2826965 | 57341.5 |
| hypothetical protein | SAMN04488505_102789 | Not Available | Positive | 2827107 - 2827673 | 22812.2 |
| aspartyl protease | SAMN04488505_102790 | Not Available | Positive | 2827708 - 2828982 | 47484.7 |
| threonine synthase | SAMN04488505_102791 | Not Available | Negative | 2829036 - 2830226 | 43401.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
