Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine and co dehydrogenase maturation factor, xdhc/coxf family | SAMN04488505_102772 | Not Available | Positive | 2805229 - 2806392 | 42101.0 |
| molybdenum cofactor cytidylyltransferase | SAMN04488505_102773 | Not Available | Positive | 2806403 - 2806978 | 20789.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102774 | Not Available | Positive | 2807113 - 2810307 | 118788.0 |
| starch-binding associating with outer membrane | SAMN04488505_102775 | Not Available | Positive | 2810328 - 2812148 | 69630.2 |
| hypothetical protein | SAMN04488505_102776 | Not Available | Negative | 2813654 - 2813851 | 7045.55 |
| bacteriocin-protection, ydei or ompd-associated | SAMN04488505_102777 | Not Available | Negative | 2814627 - 2815142 | 19188.5 |
| nicotinamidase-related amidase | SAMN04488505_102778 | Not Available | Positive | 2815328 - 2815918 | 21691.6 |
| hypothetical protein | SAMN04488505_102779 | Not Available | Negative | 2815866 - 2816909 | 40316.8 |
| xaa-pro aminopeptidase | SAMN04488505_102780 | Not Available | Negative | 2816990 - 2818372 | 50598.1 |
| protein of unknown function | SAMN04488505_102781 | Not Available | Negative | 2818421 - 2819923 | 52958.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
