Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102762 | Not Available | Negative | 2791694 - 2794945 | 121352.0 |
| dna polymerase-4 | SAMN04488505_102763 | Not Available | Positive | 2795127 - 2796218 | 40938.5 |
| arac-type dna-binding protein | SAMN04488505_102764 | Not Available | Negative | 2796223 - 2797227 | 37659.4 |
| nadph:quinone reductase | SAMN04488505_102765 | Not Available | Positive | 2797275 - 2798381 | 40018.1 |
| d-alanine transaminase | SAMN04488505_102766 | Not Available | Positive | 2798427 - 2799263 | 31329.9 |
| transcriptional regulator, tetr family | SAMN04488505_102767 | Not Available | Positive | 2800697 - 2801275 | 21781.1 |
| hypothetical protein | SAMN04488505_102768 | Not Available | Negative | 2801265 - 2801459 | 7076.33 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_102769 | Not Available | Positive | 2801479 - 2802219 | 25545.6 |
| isoquinoline 1-oxidoreductase, alpha subunit | SAMN04488505_102770 | Not Available | Positive | 2802467 - 2802931 | 16582.9 |
| isoquinoline 1-oxidoreductase, beta subunit | SAMN04488505_102771 | Not Available | Positive | 2802928 - 2805075 | 78280.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
