Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102752 | Not Available | Positive | 2773518 - 2774057 | 20333.4 |
| fecr family protein | SAMN04488505_102753 | Not Available | Positive | 2774054 - 2775346 | 48388.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102754 | Not Available | Negative | 2775377 - 2778634 | 122299.0 |
| hypothetical protein | SAMN04488505_102755 | Not Available | Negative | 2778883 - 2781819 | 110175.0 |
| v8-like glu-specific endopeptidase | SAMN04488505_102756 | Not Available | Positive | 2782157 - 2783098 | 33859.8 |
| pld-like domain-containing protein | SAMN04488505_102757 | Not Available | Positive | 2783126 - 2784682 | 57404.0 |
| hypothetical protein | SAMN04488505_102758 | Not Available | Positive | 2784693 - 2785886 | 44983.3 |
| aaa atpase domain-containing protein | SAMN04488505_102759 | Not Available | Positive | 2785891 - 2788569 | 100153.0 |
| trypsin-like peptidase domain-containing protein | SAMN04488505_102760 | Not Available | Positive | 2788569 - 2789684 | 40136.1 |
| fecr family protein | SAMN04488505_102761 | Not Available | Positive | 2790147 - 2791151 | 37317.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
