Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase specialized sigma subunit, sigma24 family | SAMN04488505_102742 | Not Available | Negative | 2758821 - 2759345 | 20460.6 |
| protein of unknown function | SAMN04488505_102743 | Not Available | Negative | 2759616 - 2761007 | 52823.4 |
| hypothetical protein | SAMN04488505_102744 | Not Available | Negative | 2761039 - 2761587 | 21635.1 |
| hypothetical protein | SAMN04488505_102745 | Not Available | Positive | 2762386 - 2763144 | 28243.2 |
| predicted atpase | SAMN04488505_102746 | Not Available | Positive | 2763249 - 2764316 | 40528.0 |
| hypothetical protein | SAMN04488505_102747 | Not Available | Positive | 2764291 - 2765019 | 28005.8 |
| hypothetical protein | SAMN04488505_102748 | Not Available | Positive | 2765054 - 2765269 | 8254.93 |
| hypothetical protein | SAMN04488505_102749 | Not Available | Negative | 2765315 - 2769673 | 167572.0 |
| hypothetical protein | SAMN04488505_102750 | Not Available | Negative | 2769916 - 2770956 | 40621.4 |
| protein of unknown function | SAMN04488505_102751 | Not Available | Positive | 2771026 - 2773086 | 77207.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
