Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd domain-containing protein | SAMN04488505_102732 | Not Available | Negative | 2741929 - 2743374 | 53967.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102733 | Not Available | Negative | 2743404 - 2746781 | 123639.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_102734 | Not Available | Positive | 2747088 - 2747663 | 22384.4 |
| fecr family protein | SAMN04488505_102735 | Not Available | Positive | 2747708 - 2748841 | 41524.7 |
| fecr family protein | SAMN04488505_102736 | Not Available | Positive | 2749111 - 2750292 | 43616.3 |
| hypothetical protein | SAMN04488505_102737 | Not Available | Positive | 2750706 - 2750984 | 10831.8 |
| hypothetical protein | SAMN04488505_102738 | Not Available | Negative | 2751136 - 2751291 | 6121.34 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488505_102739 | Not Available | Positive | 2751331 - 2754540 | 123128.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_102740 | Not Available | Negative | 2754533 - 2757184 | 98863.6 |
| hypothetical protein | SAMN04488505_102741 | Not Available | Negative | 2757395 - 2758780 | 53389.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
