Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102702 | Not Available | Negative | 2705902 - 2706798 | 33777.6 |
| sir2-like domain-containing protein | SAMN04488505_102703 | Not Available | Negative | 2706815 - 2710747 | 151763.0 |
| hypothetical protein | SAMN04488505_102704 | Not Available | Negative | 2710898 - 2711599 | 27119.5 |
| beta-glucosidase | SAMN04488505_102705 | Not Available | Negative | 2711636 - 2713936 | 84673.1 |
| hypothetical protein | SAMN04488505_102706 | Not Available | Negative | 2713953 - 2714816 | 32986.1 |
| phytanoyl-coa dioxygenase (phyh) | SAMN04488505_102707 | Not Available | Negative | 2714816 - 2715655 | 31713.1 |
| mfs transporter, sp family, arabinose:h+ symporter | SAMN04488505_102708 | Not Available | Negative | 2715660 - 2717054 | 50027.3 |
| transcriptional regulator, arac family | SAMN04488505_102709 | Not Available | Positive | 2717222 - 2718064 | 32101.8 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN04488505_102710 | Not Available | Negative | 2718074 - 2719111 | 40310.8 |
| protein of unknown function | SAMN04488505_102711 | Not Available | Negative | 2719140 - 2719778 | 24711.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
