Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102692 | Not Available | Positive | 2688099 - 2689628 | 59730.5 |
| protein kinase domain-containing protein | SAMN04488505_102693 | Not Available | Positive | 2689653 - 2691599 | 73145.3 |
| uncharacterized protein, contains gba2_n and duf608 domains | SAMN04488505_102694 | Not Available | Positive | 2691612 - 2694155 | 95062.0 |
| hypothetical protein | SAMN04488505_102695 | Not Available | Positive | 2694207 - 2695799 | 59483.7 |
| cellulose biosynthesis protein bcsq | SAMN04488505_102696 | Not Available | Negative | 2696088 - 2697083 | 37635.1 |
| glycosyl hydrolase family 67 n-terminus | SAMN04488505_102697 | Not Available | Negative | 2697452 - 2700610 | 118285.0 |
| hypothetical protein | SAMN04488505_102698 | Not Available | Positive | 2701406 - 2701642 | 8219.07 |
| hypothetical protein | SAMN04488505_102699 | Not Available | Positive | 2701800 - 2702054 | 8890.08 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488505_102700 | Not Available | Negative | 2702112 - 2704778 | 100227.0 |
| methyltransferase domain-containing protein | SAMN04488505_102701 | Not Available | Positive | 2705038 - 2705772 | 27505.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
