Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102682 | Not Available | Positive | 2675458 - 2676669 | 43904.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488505_102683 | Not Available | Negative | 2676912 - 2677745 | 29945.6 |
| arac-type dna-binding protein | SAMN04488505_102684 | Not Available | Negative | 2677827 - 2678729 | 35106.4 |
| ser/thr protein kinase rdoa involved in cpx stress response, mazf antagonist | SAMN04488505_102685 | Not Available | Positive | 2678791 - 2679795 | 39034.3 |
| l-glyceraldehyde 3-phosphate reductase | SAMN04488505_102686 | Not Available | Positive | 2679862 - 2680848 | 37150.5 |
| hypothetical protein | SAMN04488505_102687 | Not Available | Positive | 2681159 - 2681992 | 31809.5 |
| hypothetical protein | SAMN04488505_102688 | Not Available | Positive | 2682113 - 2682838 | 27456.6 |
| superfamily ii dna and rna helicase | SAMN04488505_102689 | Not Available | Negative | 2682849 - 2684234 | 50968.4 |
| hypothetical protein | SAMN04488505_102690 | Not Available | Positive | 2684702 - 2686048 | 50532.9 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN04488505_102691 | Not Available | Negative | 2686068 - 2687894 | 68531.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
