Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase | SAMN04488505_102672 | Not Available | Positive | 2659611 - 2660456 | 30768.9 |
| peptidase family s41 | SAMN04488505_102673 | Not Available | Positive | 2660486 - 2661565 | 39619.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_102674 | Not Available | Positive | 2661812 - 2662393 | 22377.1 |
| fecr family protein | SAMN04488505_102675 | Not Available | Positive | 2662482 - 2663432 | 35837.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102676 | Not Available | Positive | 2663605 - 2666913 | 121531.0 |
| starch-binding associating with outer membrane | SAMN04488505_102677 | Not Available | Positive | 2666931 - 2668466 | 57678.2 |
| glycerophosphoryl diester phosphodiesterase | SAMN04488505_102678 | Not Available | Positive | 2668489 - 2669343 | 32265.8 |
| choline dehydrogenase | SAMN04488505_102679 | Not Available | Negative | 2669483 - 2671189 | 63554.1 |
| capsule synthesis protein pga_cap | SAMN04488505_102680 | Not Available | Negative | 2671400 - 2672581 | 43401.2 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488505_102681 | Not Available | Negative | 2672686 - 2675064 | 89068.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
