Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_102662 | Not Available | Positive | 2641727 - 2642953 | 47334.9 |
| hypothetical protein | SAMN04488505_102663 | Not Available | Positive | 2643237 - 2643884 | 24634.3 |
| yhch/yjgk/yial family protein | SAMN04488505_102664 | Not Available | Positive | 2643914 - 2644369 | 16946.2 |
| transcriptional regulator, arac family with amidase-like domain | SAMN04488505_102665 | Not Available | Positive | 2644417 - 2645391 | 36542.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_102666 | Not Available | Negative | 2645490 - 2646554 | 39957.8 |
| oxidoreductase family, nad-binding rossmann fold | SAMN04488505_102667 | Not Available | Positive | 2647235 - 2648440 | 44230.0 |
| microcystin-dependent protein | SAMN04488505_102668 | Not Available | Positive | 2648509 - 2649102 | 20118.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN04488505_102669 | Not Available | Positive | 2649195 - 2650358 | 44033.9 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_102670 | Not Available | Positive | 2650392 - 2658440 | 273702.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488505_102671 | Not Available | Positive | 2658488 - 2659426 | 33851.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
