Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04488505_102652 | Not Available | Negative | 2630141 - 2630932 | 29193.2 |
| hypothetical protein | SAMN04488505_102653 | Not Available | Negative | 2631229 - 2631822 | 23022.8 |
| beta-lactamase class a | SAMN04488505_102654 | Not Available | Positive | 2632014 - 2632910 | 32886.5 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488505_102655 | Not Available | Negative | 2632886 - 2634139 | 46563.8 |
| dinb superfamily protein | SAMN04488505_102656 | Not Available | Negative | 2634480 - 2635031 | 20644.4 |
| hypothetical protein | SAMN04488505_102657 | Not Available | Positive | 2635503 - 2636102 | 22511.2 |
| hypothetical protein | SAMN04488505_102658 | Not Available | Negative | 2636034 - 2636204 | 6570.22 |
| tetratricopeptide repeat-containing protein | SAMN04488505_102659 | Not Available | Positive | 2636238 - 2637335 | 41680.4 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN04488505_102660 | Not Available | Negative | 2637397 - 2637846 | 16501.8 |
| pas/pac sensor hybrid histidine kinase | SAMN04488505_102661 | Not Available | Negative | 2637812 - 2641624 | 142498.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
