Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinoprotein glucose dehydrogenase | SAMN04488505_102622 | Not Available | Positive | 2588186 - 2590435 | 82282.0 |
| sugar phosphate isomerase/epimerase | SAMN04488505_102623 | Not Available | Positive | 2590504 - 2591406 | 34304.2 |
| fg-gap repeat-containing protein | SAMN04488505_102624 | Not Available | Positive | 2591403 - 2593274 | 67981.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102625 | Not Available | Positive | 2593500 - 2596622 | 114467.0 |
| starch-binding associating with outer membrane | SAMN04488505_102626 | Not Available | Positive | 2596646 - 2598577 | 72391.6 |
| protein of unknown function | SAMN04488505_102627 | Not Available | Positive | 2598625 - 2599350 | 26499.0 |
| cytochrome c | SAMN04488505_102628 | Not Available | Positive | 2599426 - 2599869 | 15262.8 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488505_102629 | Not Available | Positive | 2599873 - 2602116 | 82789.7 |
| alpha-1,2-mannosidase, putative | SAMN04488505_102630 | Not Available | Positive | 2602129 - 2604330 | 81436.0 |
| hypothetical protein | SAMN04488505_102631 | Not Available | Positive | 2604358 - 2605617 | 47347.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
