Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | SAMN04488505_102612 | Not Available | Positive | 2573498 - 2574259 | 28096.9 |
| hypothetical protein | SAMN04488505_102613 | Not Available | Positive | 2574441 - 2575397 | 35575.2 |
| n-ethylmaleimide reductase | SAMN04488505_102614 | Not Available | Negative | 2575587 - 2576696 | 40030.8 |
| helix-turn-helix domain-containing protein | SAMN04488505_102615 | Not Available | Positive | 2576786 - 2577643 | 33671.4 |
| protein of unknown function (4846) | SAMN04488505_102616 | Not Available | Negative | 2577725 - 2578519 | 29896.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_102617 | Not Available | Negative | 2578680 - 2581865 | 114419.0 |
| cyclic nucleotide-binding protein | SAMN04488505_102618 | Not Available | Positive | 2582129 - 2582707 | 22379.0 |
| hypothetical protein | SAMN04488505_102619 | Not Available | Positive | 2582792 - 2583202 | 15260.1 |
| hypothetical protein | SAMN04488505_102620 | Not Available | Positive | 2583359 - 2584141 | 30595.1 |
| hypothetical protein | SAMN04488505_102621 | Not Available | Positive | 2584315 - 2586918 | 99300.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
