Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102602 | Not Available | Positive | 2566439 - 2566534 | 3538.11 |
| ligand-binding srpbcc domain-containing protein | SAMN04488505_102603 | Not Available | Positive | 2566476 - 2566967 | 19012.4 |
| tigr00297 family protein | SAMN04488505_102604 | Not Available | Negative | 2566951 - 2567670 | 25418.6 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488505_102605 | Not Available | Positive | 2567841 - 2568311 | 17184.8 |
| imidazolonepropionase | SAMN04488505_102606 | Not Available | Positive | 2568377 - 2569615 | 43551.7 |
| uncharacterized conserved protein ydhg, yjbr/cyay-like superfamily, duf1801 family | SAMN04488505_102607 | Not Available | Negative | 2569672 - 2570055 | 14218.7 |
| activator of hsp90 atpase homolog 1-like protein | SAMN04488505_102608 | Not Available | Negative | 2570061 - 2570501 | 16857.7 |
| tfox n-terminal domain-containing protein | SAMN04488505_102609 | Not Available | Positive | 2570705 - 2571046 | 12744.0 |
| hypothetical protein | SAMN04488505_102610 | Not Available | Positive | 2571305 - 2571907 | 22544.6 |
| predicted oxidoreductase | SAMN04488505_102611 | Not Available | Negative | 2571975 - 2572976 | 36624.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
