Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease v | SAMN04488505_102592 | Not Available | Positive | 2557790 - 2558458 | 24598.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488505_102593 | Not Available | Negative | 2558467 - 2559645 | 44148.0 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04488505_102594 | Not Available | Negative | 2559790 - 2560680 | 32961.8 |
| transcriptional regulator, arac family with amidase-like domain | SAMN04488505_102595 | Not Available | Positive | 2560788 - 2561774 | 37606.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488505_102596 | Not Available | Negative | 2561732 - 2562556 | 29765.8 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN04488505_102597 | Not Available | Negative | 2562698 - 2563498 | 29674.7 |
| hypothetical protein | SAMN04488505_102598 | Not Available | Positive | 2563597 - 2563803 | 7786.09 |
| glycosyl hydrolase catalytic core | SAMN04488505_102599 | Not Available | Negative | 2564063 - 2564932 | 32486.6 |
| tonb family c-terminal domain-containing protein | SAMN04488505_102600 | Not Available | Negative | 2565025 - 2566002 | 36868.1 |
| hypothetical protein | SAMN04488505_102601 | Not Available | Positive | 2566092 - 2566442 | 13122.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
