Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN04488505_102582 | Not Available | Positive | 2546829 - 2547833 | 39182.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_102583 | Not Available | Negative | 2547846 - 2548646 | 31169.5 |
| hypothetical protein | SAMN04488505_102584 | Not Available | Negative | 2548761 - 2548859 | 3896.95 |
| uncharacterized membrane protein, duf4010 family | SAMN04488505_102585 | Not Available | Positive | 2548864 - 2550156 | 46043.7 |
| polyphosphate glucokinase | SAMN04488505_102586 | Not Available | Negative | 2550159 - 2550902 | 27365.8 |
| membrane dipeptidase (peptidase family m19) | SAMN04488505_102587 | Not Available | Negative | 2550952 - 2552391 | 54271.5 |
| two component transcriptional regulator, lyttr family | SAMN04488505_102588 | Not Available | Negative | 2552549 - 2553253 | 26518.7 |
| ghkl domain-containing protein | SAMN04488505_102589 | Not Available | Negative | 2553216 - 2554244 | 39082.8 |
| tonb-dependent receptor plug domain | SAMN04488505_102590 | Not Available | Positive | 2554508 - 2556703 | 82902.4 |
| hypothetical protein | SAMN04488505_102591 | Not Available | Negative | 2556761 - 2557612 | 32518.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
