Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_102572 | Not Available | Negative | 2536648 - 2537232 | 21175.8 |
| hypothetical protein | SAMN04488505_102573 | Not Available | Negative | 2537483 - 2537938 | 17105.3 |
| hypothetical protein | SAMN04488505_102574 | Not Available | Negative | 2538175 - 2538390 | 8199.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_102575 | Not Available | Negative | 2538401 - 2538997 | 21417.9 |
| transcriptional regulator, arac family | SAMN04488505_102576 | Not Available | Negative | 2539078 - 2539929 | 33491.2 |
| Trna-lys | Not Available | Not Available | Positive | 2540031 - 2540103 | Not Available |
| error-prone dna polymerase | SAMN04488505_102578 | Not Available | Negative | 2540180 - 2543380 | 120616.0 |
| protein imub | SAMN04488505_102579 | Not Available | Negative | 2543397 - 2544899 | 56730.2 |
| protein imua | SAMN04488505_102580 | Not Available | Negative | 2544901 - 2545632 | 26712.4 |
| hypothetical protein | SAMN04488505_102581 | Not Available | Positive | 2546057 - 2546704 | 24391.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
