Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | SAMN04488505_102562 | Not Available | Positive | 2524915 - 2526309 | 51112.3 |
| dna-binding transcriptional regulator, padr family | SAMN04488505_102563 | Not Available | Positive | 2526385 - 2526717 | 12490.4 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488505_102564 | Not Available | Positive | 2526719 - 2529367 | 98873.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_102565 | Not Available | Positive | 2529591 - 2530514 | 33846.3 |
| sukh-4 immunity protein | SAMN04488505_102566 | Not Available | Negative | 2530637 - 2531245 | 23339.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_102567 | Not Available | Negative | 2531388 - 2532125 | 26735.7 |
| arac-type dna-binding protein | SAMN04488505_102568 | Not Available | Negative | 2532206 - 2533069 | 32930.6 |
| cu2+-exporting atpase | SAMN04488505_102569 | Not Available | Negative | 2533490 - 2535553 | 74774.0 |
| protein of unknown function | SAMN04488505_102570 | Not Available | Negative | 2535648 - 2536130 | 18440.5 |
| haem-binding domain-containing protein | SAMN04488505_102571 | Not Available | Negative | 2536177 - 2536641 | 17659.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
