Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102542 | Not Available | Positive | 2494354 - 2494710 | 13706.8 |
| glyoxalase-like domain-containing protein | SAMN04488505_102543 | Not Available | Negative | 2494758 - 2495147 | 14799.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102544 | Not Available | Positive | 2495909 - 2499034 | 114597.0 |
| starch-binding associating with outer membrane | SAMN04488505_102545 | Not Available | Positive | 2499060 - 2500763 | 63530.3 |
| right handed beta helix region | SAMN04488505_102546 | Not Available | Negative | 2500838 - 2502037 | 43376.6 |
| protein of unknown function (du1801) | SAMN04488505_102547 | Not Available | Negative | 2502235 - 2502618 | 14816.3 |
| lipase (class 3) | SAMN04488505_102548 | Not Available | Negative | 2502867 - 2503829 | 34910.2 |
| transcriptional regulator, laci family | SAMN04488505_102549 | Not Available | Positive | 2504250 - 2505254 | 37498.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102550 | Not Available | Positive | 2505522 - 2508689 | 116799.0 |
| starch-binding associating with outer membrane | SAMN04488505_102551 | Not Available | Positive | 2508709 - 2510544 | 69394.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
