Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102512 | Not Available | Positive | 2467733 - 2468377 | 23395.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_102513 | Not Available | Positive | 2468389 - 2469786 | 49120.6 |
| smp-30/gluconolaconase/lre-like region-containing protein | SAMN04488505_102514 | Not Available | Positive | 2469958 - 2470935 | 35975.2 |
| hypothetical protein | SAMN04488505_102515 | Not Available | Positive | 2470961 - 2472268 | 49508.1 |
| dyp-type peroxidase family | SAMN04488505_102516 | Not Available | Positive | 2472271 - 2473662 | 51964.3 |
| dinb superfamily protein | SAMN04488505_102517 | Not Available | Negative | 2473657 - 2474172 | 19772.8 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04488505_102518 | Not Available | Negative | 2474191 - 2474598 | 14478.3 |
| uncharacterized conserved protein yfes, contains wgr domain | SAMN04488505_102519 | Not Available | Negative | 2474699 - 2475382 | 25990.9 |
| hypothetical protein | SAMN04488505_102520 | Not Available | Positive | 2475415 - 2475516 | 3887.83 |
| hypothetical protein | SAMN04488505_102521 | Not Available | Negative | 2475523 - 2476002 | 18127.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
