Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate lyase | SAMN04488505_102502 | Not Available | Negative | 2452140 - 2453366 | 45075.3 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488505_102503 | Not Available | Positive | 2453621 - 2454814 | 44218.0 |
| hypothetical protein | SAMN04488505_102504 | Not Available | Positive | 2454961 - 2455353 | 13384.1 |
| hlyd family secretion protein | SAMN04488505_102505 | Not Available | Negative | 2455476 - 2456774 | 49289.7 |
| atp-binding cassette, subfamily b | SAMN04488505_102506 | Not Available | Negative | 2456790 - 2459189 | 89884.3 |
| protein-disulfide isomerase | SAMN04488505_102507 | Not Available | Negative | 2459822 - 2461426 | 59560.6 |
| two component regulator propeller | SAMN04488505_102508 | Not Available | Positive | 2461718 - 2464684 | 112392.0 |
| two component transcriptional regulator, lyttr family | SAMN04488505_102509 | Not Available | Positive | 2464687 - 2465430 | 27973.0 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN04488505_102510 | Not Available | Negative | 2465457 - 2465873 | 14961.8 |
| glycosyl hydrolases family 28 | SAMN04488505_102511 | Not Available | Negative | 2465904 - 2467478 | 57936.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
