Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102492 | Not Available | Negative | 2434246 - 2436906 | 100087.0 |
| protein of unknown function | SAMN04488505_102493 | Not Available | Negative | 2436921 - 2437454 | 18248.0 |
| hypothetical protein | SAMN04488505_102494 | Not Available | Negative | 2437459 - 2445432 | 270087.0 |
| hypothetical protein | SAMN04488505_102495 | Not Available | Negative | 2445475 - 2446344 | 31538.1 |
| protein of unknown function | SAMN04488505_102496 | Not Available | Negative | 2446432 - 2446947 | 17037.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_102497 | Not Available | Positive | 2447254 - 2448201 | 34258.5 |
| hypothetical protein | SAMN04488505_102498 | Not Available | Negative | 2448309 - 2449712 | 51865.2 |
| hypothetical protein | SAMN04488505_102499 | Not Available | Negative | 2450022 - 2450282 | 8806.41 |
| hypothetical protein | SAMN04488505_102500 | Not Available | Negative | 2450368 - 2451420 | 39646.5 |
| methylamine utilisation protein maue | SAMN04488505_102501 | Not Available | Negative | 2451434 - 2451880 | 16883.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
