Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102482 | Not Available | Positive | 2420311 - 2421216 | 33014.3 |
| response regulator receiver domain-containing protein | SAMN04488505_102483 | Not Available | Positive | 2421422 - 2421787 | 13659.9 |
| pas domain s-box-containing protein | SAMN04488505_102484 | Not Available | Negative | 2421784 - 2426829 | 190117.0 |
| two-component system, chemotaxis family, response regulator cheb | SAMN04488505_102485 | Not Available | Negative | 2426950 - 2427987 | 38043.6 |
| tap-like protein | SAMN04488505_102486 | Not Available | Negative | 2428150 - 2429589 | 53758.5 |
| hypothetical protein | SAMN04488505_102487 | Not Available | Negative | 2429655 - 2430461 | 30820.4 |
| abc-2 type transport system permease protein | SAMN04488505_102488 | Not Available | Negative | 2430732 - 2431739 | 36807.9 |
| abc-2 type transport system atp-binding protein | SAMN04488505_102489 | Not Available | Negative | 2431681 - 2432700 | 37375.3 |
| npcbm-associated, new3 domain of alpha-galactosidase | SAMN04488505_102490 | Not Available | Negative | 2432706 - 2433485 | 28083.8 |
| hypothetical protein | SAMN04488505_102491 | Not Available | Positive | 2433811 - 2434245 | 15726.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
