Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_102452 | Not Available | Negative | 2374722 - 2377970 | 122007.0 |
| hypothetical protein | SAMN04488505_102453 | Not Available | Negative | 2378532 - 2379359 | 30991.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_102454 | Not Available | Positive | 2380198 - 2380983 | 28010.9 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488505_102455 | Not Available | Negative | 2381047 - 2382105 | 39623.5 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_102456 | Not Available | Negative | 2382118 - 2386989 | 166984.0 |
| beta-xylosidase, gh43 family | SAMN04488505_102457 | Not Available | Positive | 2387128 - 2388660 | 56465.9 |
| uncharacterized protein | SAMN04488505_102458 | Not Available | Negative | 2388672 - 2390177 | 55595.5 |
| glycosyl hydrolases family 43 | SAMN04488505_102459 | Not Available | Negative | 2390219 - 2391328 | 41514.7 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04488505_102460 | Not Available | Positive | 2391403 - 2391912 | 18933.7 |
| chemotaxis protein motb | SAMN04488505_102461 | Not Available | Negative | 2392007 - 2392882 | 32099.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
