Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 2364000 - 2364070 | Not Available |
| ribosomal protein s18 acetylase rimi | SAMN04488505_102443 | Not Available | Positive | 2364146 - 2364640 | 18199.0 |
| protein of unknown function | SAMN04488505_102444 | Not Available | Negative | 2364635 - 2365372 | 27203.3 |
| predicted dehydrogenase | SAMN04488505_102445 | Not Available | Negative | 2365471 - 2366769 | 48048.5 |
| dna-binding transcriptional regulator, merr family | SAMN04488505_102446 | Not Available | Negative | 2367002 - 2367766 | 29339.8 |
| magnesium chelatase subunit i | SAMN04488505_102447 | Not Available | Negative | 2367977 - 2369488 | 57069.4 |
| hypothetical protein | SAMN04488505_102448 | Not Available | Negative | 2369589 - 2370683 | 41646.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_102449 | Not Available | Positive | 2371390 - 2372415 | 36868.5 |
| transcriptional regulator, arac family | SAMN04488505_102450 | Not Available | Positive | 2372483 - 2373289 | 30781.2 |
| sugar phosphate isomerase/epimerase | SAMN04488505_102451 | Not Available | Positive | 2373682 - 2374530 | 31727.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
