Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein yfho | SAMN04488505_102432 | Not Available | Negative | 2350280 - 2352796 | 93367.9 |
| hypothetical protein | SAMN04488505_102433 | Not Available | Positive | 2353098 - 2353313 | 8067.45 |
| hypothetical protein | SAMN04488505_102434 | Not Available | Positive | 2353310 - 2354092 | 29243.4 |
| methyltransferase domain-containing protein | SAMN04488505_102435 | Not Available | Positive | 2354144 - 2354887 | 28544.0 |
| hypothetical protein | SAMN04488505_102436 | Not Available | Negative | 2355053 - 2356729 | 60327.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102437 | Not Available | Negative | 2356754 - 2359918 | 115508.0 |
| nudix domain-containing protein | SAMN04488505_102438 | Not Available | Negative | 2360287 - 2360736 | 17077.3 |
| magnesium transporter | SAMN04488505_102439 | Not Available | Negative | 2360771 - 2361709 | 36329.1 |
| diaminopimelate epimerase | SAMN04488505_102440 | Not Available | Negative | 2361843 - 2362625 | 29083.2 |
| uridine phosphorylase | SAMN04488505_102441 | Not Available | Negative | 2362940 - 2363818 | 32351.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
