Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein spr | SAMN04488505_102422 | Not Available | Positive | 2340687 - 2341358 | 24589.9 |
| glycosyl transferase family 2 | SAMN04488505_102423 | Not Available | Positive | 2341464 - 2342306 | 32669.3 |
| hypothetical protein | SAMN04488505_102424 | Not Available | Positive | 2342299 - 2343060 | 29427.3 |
| methyltransferase domain-containing protein | SAMN04488505_102425 | Not Available | Positive | 2343050 - 2343781 | 28056.8 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488505_102426 | Not Available | Negative | 2343784 - 2345286 | 56906.3 |
| glycosyltransferase like family protein | SAMN04488505_102427 | Not Available | Positive | 2345379 - 2346272 | 32730.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_102428 | Not Available | Positive | 2346269 - 2347216 | 36820.4 |
| hypothetical protein | SAMN04488505_102429 | Not Available | Positive | 2347222 - 2348226 | 37835.8 |
| methyltransferase domain-containing protein | SAMN04488505_102430 | Not Available | Positive | 2348317 - 2349144 | 31848.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_102431 | Not Available | Negative | 2349153 - 2350283 | 41748.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
