Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102412 | Not Available | Negative | 2322587 - 2323135 | 20537.4 |
| predicted dehydrogenase | SAMN04488505_102413 | Not Available | Positive | 2323259 - 2324548 | 48905.1 |
| aminodeoxyfutalosine synthase | SAMN04488505_102414 | Not Available | Negative | 2324722 - 2325906 | 45426.5 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_102415 | Not Available | Negative | 2325903 - 2328068 | 78309.0 |
| concentrative nucleoside transporter, cnt family | SAMN04488505_102416 | Not Available | Negative | 2328162 - 2329853 | 61371.7 |
| hypothetical protein | SAMN04488505_102417 | Not Available | Positive | 2330018 - 2331106 | 40711.7 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_102418 | Not Available | Positive | 2331194 - 2335066 | 137535.0 |
| fructose-bisphosphate aldolase, class i | SAMN04488505_102419 | Not Available | Negative | 2335071 - 2336123 | 38231.8 |
| thioredoxin | SAMN04488505_102420 | Not Available | Negative | 2336275 - 2336592 | 11516.8 |
| dna polymerase iii, alpha subunit | SAMN04488505_102421 | Not Available | Negative | 2336849 - 2340490 | 138092.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
