Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN04488505_102402 | Not Available | Positive | 2305348 - 2306814 | 56250.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_102403 | Not Available | Negative | 2306885 - 2307919 | 38495.1 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | SAMN04488505_102404 | Not Available | Positive | 2308147 - 2309766 | 62110.8 |
| protein of unknown function | SAMN04488505_102405 | Not Available | Negative | 2309755 - 2309934 | 6928.09 |
| tigr01666 family membrane protein | SAMN04488505_102406 | Not Available | Negative | 2310009 - 2312222 | 83952.5 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_102407 | Not Available | Negative | 2312651 - 2315089 | 90133.0 |
| condensin subunit smc | SAMN04488505_102408 | Not Available | Positive | 2315471 - 2319001 | 134406.0 |
| putative toxin-antitoxin system antitoxin component, tigr02293 family | SAMN04488505_102409 | Not Available | Positive | 2319070 - 2319579 | 18699.7 |
| res domain-containing protein | SAMN04488505_102410 | Not Available | Positive | 2319588 - 2320052 | 17246.7 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN04488505_102411 | Not Available | Positive | 2320176 - 2322479 | 85537.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
