Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terpene synthase family, metal binding domain | SAMN04488505_102392 | Not Available | Positive | 2290892 - 2291857 | 36835.1 |
| predicted membrane protein | SAMN04488505_102393 | Not Available | Negative | 2292046 - 2293134 | 42622.0 |
| solute:na+ symporter, sss family | SAMN04488505_102394 | Not Available | Positive | 2293197 - 2294828 | 59992.8 |
| inositol oxygenase | SAMN04488505_102395 | Not Available | Positive | 2295193 - 2296074 | 35029.9 |
| isopentenyl-diphosphate delta-isomerase | SAMN04488505_102396 | Not Available | Negative | 2296149 - 2296661 | 19592.2 |
| hypothetical protein | SAMN04488505_102397 | Not Available | Negative | 2296703 - 2298022 | 49146.6 |
| fe-s oxidoreductase | SAMN04488505_102398 | Not Available | Negative | 2298157 - 2301087 | 109484.0 |
| uncharacterized conserved protein yece, duf72 family | SAMN04488505_102399 | Not Available | Negative | 2301350 - 2302255 | 35173.2 |
| starch synthase | SAMN04488505_102400 | Not Available | Positive | 2302332 - 2303762 | 53709.9 |
| glucose-1-phosphate adenylyltransferase | SAMN04488505_102401 | Not Available | Positive | 2303928 - 2305199 | 47282.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
