Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase (non-hydrolysing) | SAMN04488505_102382 | Not Available | Positive | 2278923 - 2280041 | 41059.5 |
| heparinase ii/iii n-terminus | SAMN04488505_102383 | Not Available | Positive | 2280038 - 2281933 | 73816.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_102384 | Not Available | Positive | 2281930 - 2283195 | 48395.5 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04488505_102385 | Not Available | Positive | 2283182 - 2283796 | 23055.6 |
| sugar o-acyltransferase, sialic acid o-acetyltransferase neud family | SAMN04488505_102386 | Not Available | Positive | 2283793 - 2284410 | 21162.4 |
| degt/dnrj/eryc1/strs aminotransferase family protein | SAMN04488505_102387 | Not Available | Positive | 2284439 - 2285569 | 41146.4 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04488505_102388 | Not Available | Positive | 2285587 - 2287197 | 61078.5 |
| tyrosine-protein phosphatase ywqe | SAMN04488505_102389 | Not Available | Negative | 2287194 - 2287946 | 28923.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_102390 | Not Available | Positive | 2288167 - 2289735 | 56847.9 |
| gaf domain-containing protein | SAMN04488505_102391 | Not Available | Negative | 2289764 - 2290237 | 17246.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
