Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04488505_102372 | Not Available | Positive | 2263469 - 2265478 | 75664.7 |
| polysaccharide export outer membrane protein | SAMN04488505_102373 | Not Available | Positive | 2265527 - 2266360 | 30932.7 |
| capsular exopolysaccharide family | SAMN04488505_102374 | Not Available | Positive | 2266400 - 2268757 | 89494.2 |
| udp-n-acetyl-d-galactosamine dehydrogenase | SAMN04488505_102375 | Not Available | Positive | 2268779 - 2270098 | 48979.0 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488505_102376 | Not Available | Positive | 2270113 - 2271678 | 57925.7 |
| hypothetical protein | SAMN04488505_102377 | Not Available | Positive | 2271671 - 2273101 | 54621.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_102378 | Not Available | Positive | 2273104 - 2274180 | 40806.9 |
| parallel beta-helix repeat (two copies) | SAMN04488505_102379 | Not Available | Positive | 2274263 - 2275588 | 48229.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_102380 | Not Available | Positive | 2275627 - 2276763 | 42854.0 |
| predicted dehydrogenase | SAMN04488505_102381 | Not Available | Positive | 2276738 - 2278909 | 78481.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
