Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose-h+ transport protein | SAMN04488505_102362 | Not Available | Positive | 2251174 - 2252232 | 38539.5 |
| rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | SAMN04488505_102363 | Not Available | Positive | 2252368 - 2254491 | 77000.3 |
| l-rhamnose isomerase / sugar isomerase | SAMN04488505_102364 | Not Available | Positive | 2254606 - 2255880 | 47152.0 |
| sugar (pentulose or hexulose) kinase | SAMN04488505_102365 | Not Available | Positive | 2256082 - 2257458 | 51537.6 |
| l-lactate dehydrogenase complex protein llde | SAMN04488505_102366 | Not Available | Positive | 2257645 - 2258379 | 27130.7 |
| l-lactate dehydrogenase complex protein lldf | SAMN04488505_102367 | Not Available | Positive | 2258511 - 2259881 | 51450.0 |
| l-lactate dehydrogenase complex protein lldg | SAMN04488505_102368 | Not Available | Positive | 2259878 - 2260468 | 21120.5 |
| l-rhamnose mutarotase | SAMN04488505_102369 | Not Available | Positive | 2260615 - 2260908 | 11197.2 |
| transcriptional regulator, gntr family | SAMN04488505_102370 | Not Available | Negative | 2261467 - 2262489 | 39066.6 |
| hypothetical protein | SAMN04488505_102371 | Not Available | Positive | 2263180 - 2263305 | 4886.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
