Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN04488505_102352 | Not Available | Negative | 2233982 - 2235004 | 38522.3 |
| d-xylose isomerase | SAMN04488505_102353 | Not Available | Positive | 2235133 - 2236464 | 49694.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102354 | Not Available | Positive | 2236878 - 2240171 | 122712.0 |
| susd family protein | SAMN04488505_102355 | Not Available | Positive | 2240184 - 2241629 | 53382.1 |
| hypothetical protein | SAMN04488505_102356 | Not Available | Positive | 2241909 - 2242166 | 9148.12 |
| hypothetical protein | SAMN04488505_102357 | Not Available | Positive | 2242232 - 2243305 | 40957.8 |
| uncharacterized membrane protein yqik, contains band7/phb/spfh domain | SAMN04488505_102358 | Not Available | Positive | 2243761 - 2245659 | 69504.1 |
| arac-type dna-binding protein | SAMN04488505_102359 | Not Available | Negative | 2245911 - 2246954 | 40617.0 |
| helicase | SAMN04488505_102360 | Not Available | Positive | 2247342 - 2249540 | 81789.2 |
| luciferase family oxidoreductase, group 1 | SAMN04488505_102361 | Not Available | Positive | 2249903 - 2250913 | 37666.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
