Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small-conductance mechanosensitive channel | SAMN04488505_102342 | Not Available | Negative | 2220709 - 2221794 | 41288.7 |
| hypothetical protein | SAMN04488505_102343 | Not Available | Positive | 2221877 - 2223334 | 54847.6 |
| tryptophanase | SAMN04488505_102344 | Not Available | Positive | 2223578 - 2224948 | 50660.1 |
| transcriptional regulator, tetr family | SAMN04488505_102345 | Not Available | Positive | 2225313 - 2225954 | 24650.3 |
| outer membrane protein tolc | SAMN04488505_102346 | Not Available | Positive | 2225944 - 2227284 | 48756.1 |
| membrane fusion protein, multidrug efflux system | SAMN04488505_102347 | Not Available | Positive | 2227339 - 2228478 | 41300.8 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN04488505_102348 | Not Available | Positive | 2228498 - 2230078 | 57962.1 |
| alpha-n-acetylglucosaminidase | SAMN04488505_102349 | Not Available | Positive | 2230226 - 2232445 | 84934.6 |
| uncharacterized membrane protein | SAMN04488505_102350 | Not Available | Negative | 2232471 - 2232869 | 14833.8 |
| hypothetical protein | SAMN04488505_102351 | Not Available | Negative | 2232873 - 2233709 | 28712.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
