Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative toxin-antitoxin system antitoxin component, tigr02293 family | SAMN04488505_102332 | Not Available | Negative | 2209286 - 2209957 | 24398.4 |
| cu2+-exporting atpase | SAMN04488505_102333 | Not Available | Positive | 2210092 - 2212353 | 80632.9 |
| copper chaperone copz | SAMN04488505_102334 | Not Available | Positive | 2212366 - 2212578 | 7549.99 |
| hypothetical protein | SAMN04488505_102335 | Not Available | Positive | 2212689 - 2213054 | 13110.1 |
| heavy metal efflux pump, czca family | SAMN04488505_102336 | Not Available | Positive | 2213142 - 2214428 | 47433.8 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | SAMN04488505_102337 | Not Available | Positive | 2214431 - 2216356 | 71098.2 |
| outer membrane protein tolc | SAMN04488505_102338 | Not Available | Positive | 2216307 - 2217593 | 48755.4 |
| multidrug efflux pump subunit acra (membrane-fusion protein) | SAMN04488505_102339 | Not Available | Positive | 2217571 - 2218764 | 42799.7 |
| membrane fusion protein, cu(i)/ag(i) efflux system | SAMN04488505_102340 | Not Available | Positive | 2218766 - 2219965 | 43768.7 |
| protein of unknown function | SAMN04488505_102341 | Not Available | Positive | 2219995 - 2220522 | 18647.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
