Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical phage tail region protein | SAMN04488505_102322 | Not Available | Negative | 2199642 - 2200130 | 18619.2 |
| conserved hypothetical phage tail region protein | SAMN04488505_102323 | Not Available | Negative | 2200134 - 2200565 | 15458.5 |
| hypothetical protein | SAMN04488505_102324 | Not Available | Negative | 2200622 - 2202064 | 51872.8 |
| hypothetical protein | SAMN04488505_102325 | Not Available | Negative | 2202076 - 2203263 | 43167.5 |
| protein of unknown function | SAMN04488505_102326 | Not Available | Negative | 2203276 - 2203890 | 23598.3 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN04488505_102327 | Not Available | Negative | 2204555 - 2205799 | 43593.1 |
| transcriptional regulator, tetr family | SAMN04488505_102328 | Not Available | Negative | 2205860 - 2206414 | 20821.5 |
| mfs transporter, sugar porter (sp) family | SAMN04488505_102329 | Not Available | Positive | 2206595 - 2207920 | 48448.6 |
| helix-turn-helix domain-containing protein | SAMN04488505_102330 | Not Available | Positive | 2208219 - 2208752 | 19617.7 |
| res domain-containing protein | SAMN04488505_102331 | Not Available | Negative | 2208749 - 2209228 | 18490.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
