Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pregnancy-associated plasma protein-a | SAMN04488505_102302 | Not Available | Negative | 2169944 - 2170936 | 35631.3 |
| arac-type transcriptional regulator n-terminus | SAMN04488505_102303 | Not Available | Negative | 2171092 - 2172024 | 35679.8 |
| glutathione-independent formaldehyde dehydrogenase | SAMN04488505_102304 | Not Available | Positive | 2172177 - 2173367 | 41627.4 |
| uncharacterized conserved protein glcg, duf336 family | SAMN04488505_102305 | Not Available | Positive | 2173470 - 2173871 | 13634.5 |
| hypothetical protein | SAMN04488505_102306 | Not Available | Positive | 2173935 - 2175197 | 47791.2 |
| hypothetical protein | SAMN04488505_102307 | Not Available | Negative | 2175201 - 2176817 | 59065.9 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04488505_102308 | Not Available | Negative | 2176843 - 2179422 | 93133.1 |
| protein of unknown function | SAMN04488505_102309 | Not Available | Negative | 2179435 - 2181384 | 70855.9 |
| protein of unknown function | SAMN04488505_102310 | Not Available | Negative | 2181401 - 2182345 | 35597.2 |
| hypothetical protein | SAMN04488505_102311 | Not Available | Negative | 2182494 - 2182772 | 10195.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
