Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like enzyme, putative cysteine protease | SAMN04488505_102292 | Not Available | Negative | 2141776 - 2142711 | 34852.3 |
| uncharacterized conserved protein, alpha-e superfamily | SAMN04488505_102293 | Not Available | Negative | 2142730 - 2143671 | 36433.6 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN04488505_102294 | Not Available | Negative | 2143835 - 2145280 | 54063.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102295 | Not Available | Positive | 2145814 - 2148993 | 117169.0 |
| susd family protein | SAMN04488505_102296 | Not Available | Positive | 2149013 - 2150533 | 58493.6 |
| hypothetical protein | SAMN04488505_102297 | Not Available | Positive | 2150565 - 2151251 | 26172.2 |
| protein of unknown function | SAMN04488505_102298 | Not Available | Positive | 2151270 - 2152250 | 37058.3 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_102299 | Not Available | Positive | 2153046 - 2166815 | 477049.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488505_102300 | Not Available | Positive | 2166836 - 2167804 | 35459.6 |
| wd40-like beta propeller repeat | SAMN04488505_102301 | Not Available | Positive | 2167831 - 2169912 | 78260.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
