Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygalactonokinase | SAMN04488505_102272 | Not Available | Positive | 2105966 - 2106943 | 35726.8 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN04488505_102273 | Not Available | Positive | 2106947 - 2107606 | 23921.9 |
| short-chain dehydrogenase | SAMN04488505_102274 | Not Available | Positive | 2107613 - 2108413 | 29168.3 |
| dihydroxyacid dehydratase | SAMN04488505_102275 | Not Available | Positive | 2108653 - 2110368 | 62219.5 |
| gnt-i system high-affinity gluconate transporter | SAMN04488505_102276 | Not Available | Positive | 2110481 - 2111794 | 46740.7 |
| calcineurin-like phosphoesterase | SAMN04488505_102277 | Not Available | Positive | 2111813 - 2112649 | 31610.5 |
| peptidase family m28 | SAMN04488505_102278 | Not Available | Negative | 2112650 - 2114203 | 57412.1 |
| hypothetical protein | SAMN04488505_102279 | Not Available | Negative | 2114355 - 2116166 | 65371.3 |
| condensation domain-containing protein | SAMN04488505_102280 | Not Available | Negative | 2116641 - 2117933 | 48358.8 |
| uncharacterized protein, contains a nrps condensation (elongation) domain | SAMN04488505_102281 | Not Available | Negative | 2118063 - 2119349 | 48959.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
