Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (du1801) | SAMN04488505_102252 | Not Available | Negative | 2085142 - 2085567 | 15685.8 |
| undecaprenyl-diphosphatase | SAMN04488505_102253 | Not Available | Positive | 2085837 - 2086475 | 23251.9 |
| lysophospholipase l1 | SAMN04488505_102254 | Not Available | Negative | 2086494 - 2087222 | 26390.5 |
| hypothetical protein | SAMN04488505_102255 | Not Available | Negative | 2087307 - 2087675 | 14040.1 |
| ycii-related domain-containing protein | SAMN04488505_102256 | Not Available | Negative | 2087781 - 2088116 | 12849.3 |
| arac-type dna-binding protein | SAMN04488505_102257 | Not Available | Positive | 2088256 - 2088675 | 16373.7 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN04488505_102258 | Not Available | Positive | 2088740 - 2089189 | 16556.8 |
| phospholipase c | SAMN04488505_102259 | Not Available | Positive | 2089278 - 2091809 | 95229.9 |
| putative abc transport system permease protein | SAMN04488505_102260 | Not Available | Positive | 2091940 - 2094390 | 91749.1 |
| thioredoxin reductase | SAMN04488505_102261 | Not Available | Negative | 2094394 - 2095299 | 32508.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
