Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102232 | Not Available | Negative | 2066441 - 2067121 | 26953.5 |
| Trna-lys | Not Available | Not Available | Positive | 2067408 - 2067483 | Not Available |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN04488505_102234 | Not Available | Negative | 2067547 - 2068323 | 28827.4 |
| dna-binding transcriptional regulator, lysr family | SAMN04488505_102235 | Not Available | Negative | 2068347 - 2069228 | 32132.5 |
| cupin domain protein | SAMN04488505_102236 | Not Available | Positive | 2069319 - 2069729 | 14370.4 |
| tautomerase enzyme | SAMN04488505_102237 | Not Available | Positive | 2069734 - 2070117 | 14437.5 |
| subtilase family protein | SAMN04488505_102238 | Not Available | Positive | 2070401 - 2071891 | 53355.6 |
| tonb protein c-terminal | SAMN04488505_102239 | Not Available | Positive | 2071986 - 2072735 | 27624.3 |
| hypothetical protein | SAMN04488505_102240 | Not Available | Negative | 2072778 - 2075213 | 92916.8 |
| wg containing repeat-containing protein | SAMN04488505_102241 | Not Available | Negative | 2075218 - 2076486 | 47534.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
