Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_102222 | Not Available | Negative | 2056399 - 2057133 | 25726.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_102223 | Not Available | Negative | 2057286 - 2057867 | 23086.9 |
| hypothetical protein | SAMN04488505_102224 | Not Available | Negative | 2057938 - 2058108 | 6627.88 |
| hypothetical protein | SAMN04488505_102225 | Not Available | Positive | 2058506 - 2059231 | 26742.0 |
| hypothetical protein | SAMN04488505_102226 | Not Available | Positive | 2059393 - 2059506 | 4433.34 |
| hypothetical protein | SAMN04488505_102227 | Not Available | Positive | 2059685 - 2060668 | 34326.6 |
| hypothetical protein | SAMN04488505_102228 | Not Available | Negative | 2060809 - 2060934 | 4903.16 |
| hypothetical protein | SAMN04488505_102229 | Not Available | Positive | 2061402 - 2061500 | 3388.97 |
| aaa domain-containing protein, putative abieii toxin, type iv ta system | SAMN04488505_102230 | Not Available | Negative | 2061566 - 2063446 | 71658.5 |
| hypothetical protein | SAMN04488505_102231 | Not Available | Positive | 2064259 - 2066205 | 76118.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
