Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain | SAMN04488505_102162 | Not Available | Positive | 1991663 - 1994035 | 89067.9 |
| protein of unknown function | SAMN04488505_102163 | Not Available | Positive | 1994052 - 1994873 | 30430.4 |
| alcohol dehydrogenase, propanol-preferring | SAMN04488505_102164 | Not Available | Negative | 1995045 - 1996079 | 36633.5 |
| hypothetical protein | SAMN04488505_102165 | Not Available | Positive | 1996306 - 1997142 | 31694.2 |
| hypothetical protein | SAMN04488505_102166 | Not Available | Positive | 1997324 - 1997701 | 14629.0 |
| thioredoxin-related protein | SAMN04488505_102167 | Not Available | Positive | 1997868 - 1998311 | 16727.9 |
| thiamine biosynthesis lipoprotein | SAMN04488505_102168 | Not Available | Positive | 1998298 - 1999248 | 34675.9 |
| protein of unknown function | SAMN04488505_102169 | Not Available | Positive | 1999257 - 1999469 | 7392.97 |
| protein of unknown function | SAMN04488505_102170 | Not Available | Positive | 1999494 - 2000687 | 44702.4 |
| phospholipid-binding protein, pbp family | SAMN04488505_102171 | Not Available | Negative | 2000760 - 2001239 | 17642.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
