Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wd40-like beta propeller repeat | SAMN04488505_102142 | Not Available | Negative | 1962094 - 1962948 | 32166.3 |
| hypothetical protein | SAMN04488505_102143 | Not Available | Positive | 1963343 - 1964305 | 34827.2 |
| hypothetical protein | SAMN04488505_102144 | Not Available | Negative | 1964369 - 1964830 | 17527.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_102145 | Not Available | Positive | 1965009 - 1965563 | 22017.2 |
| fecr family protein | SAMN04488505_102146 | Not Available | Positive | 1965633 - 1966682 | 39511.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102147 | Not Available | Positive | 1966769 - 1969927 | 114005.0 |
| starch-binding associating with outer membrane | SAMN04488505_102148 | Not Available | Positive | 1969945 - 1971546 | 60165.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_102149 | Not Available | Positive | 1971641 - 1977103 | 194312.0 |
| haloacetate dehalogenase | SAMN04488505_102150 | Not Available | Positive | 1977276 - 1978193 | 33863.4 |
| hypothetical protein | SAMN04488505_102151 | Not Available | Negative | 1978170 - 1978346 | 6437.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
