Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN04488505_101147 | Not Available | Negative | 196903 - 198099 | 43436.6 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04488505_101148 | Not Available | Negative | 198318 - 199196 | 31331.7 |
| transcriptional regulator, arac family | SAMN04488505_101149 | Not Available | Negative | 199295 - 200206 | 34979.9 |
| acetyltransferase (gnat) family protein | SAMN04488505_101150 | Not Available | Negative | 200229 - 200705 | 18136.9 |
| dna-binding transcriptional regulator, marr family | SAMN04488505_101151 | Not Available | Negative | 200713 - 201189 | 18164.2 |
| imidazolonepropionase | SAMN04488505_101152 | Not Available | Positive | 201474 - 203213 | 63933.6 |
| pectate lyase superfamily protein | SAMN04488505_101153 | Not Available | Positive | 203611 - 205989 | 86061.4 |
| hypothetical protein | SAMN04488505_101154 | Not Available | Negative | 205995 - 206441 | 15885.9 |
| hypothetical protein | SAMN04488505_101155 | Not Available | Negative | 206472 - 207509 | 39487.5 |
| hypothetical protein | SAMN04488505_101156 | Not Available | Negative | 207502 - 208311 | 30188.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
