Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488505_10197 | Not Available | Negative | 114080 - 115420 | 50349.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10198 | Not Available | Negative | 115421 - 118915 | 129995.0 |
| magnesium chelatase family protein | SAMN04488505_10199 | Not Available | Positive | 119177 - 120718 | 56313.5 |
| aquaporin z | SAMN04488505_101100 | Not Available | Positive | 121082 - 121795 | 24332.6 |
| phosphotransferase enzyme family protein | SAMN04488505_101101 | Not Available | Negative | 121809 - 122804 | 37747.2 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN04488505_101102 | Not Available | Negative | 122932 - 125061 | 79535.3 |
| atp-binding cassette, subfamily b | SAMN04488505_101103 | Not Available | Positive | 125368 - 127107 | 64696.7 |
| protein of unknown function | SAMN04488505_101104 | Not Available | Positive | 127232 - 127642 | 16652.4 |
| hexosaminidase | SAMN04488505_101105 | Not Available | Negative | 127785 - 129689 | 72253.1 |
| iron complex outermembrane recepter protein | SAMN04488505_101106 | Not Available | Negative | 129955 - 132402 | 89467.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
